| Tool | Description | |------|-------------| | | Latest stable version – similar interface, fewer bugs. | | PyRx 0.8 | GUI for AutoDock Vina – easier for beginners. | | AutoDock Vina + Open Babel | Command-line workflow, no GUI needed. | | QDock | Modern Qt-based GUI for AutoDock. | | Docker + ADT | Run legacy ADT in a container on modern OS. | Final Checklist ✅ Downloaded from Scripps FTP or official registration site ✅ Correct installer for your OS and architecture ✅ MD5 checksum matched (optional) ✅ Installed in a short path without spaces ✅ Launched successfully and loaded a PDB file
If you encounter persistent issues, consider upgrading to ADT 1.5.7 or switching to PyRx, as ADT 1.5.6 is no longer supported and uses deprecated Python 2.7. Autodock Tools 1.5 6 Download
wget ftp://ftp.scripps.edu/pub/olson-web/mgltools/1.5.6/mgltools_1.5.6_Linux_x86_64_installer.tar.gz Check the MD5 checksum (provided on the FTP site in MD5SUM.txt ). Example for Linux 64-bit: | Tool | Description | |------|-------------| | |
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